Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_25130 | P09925 | Positive | 5415717 - 5416580 | 30782.5 |
| histidine kinase | APR52_25135 | P0C0Z0 | Positive | 5416564 - 5417949 | 49916.6 |
| two-component system response regulator | APR52_25140 | A6UEL7 | Positive | 5417930 - 5418505 | 20906.8 |
| hemolysin d | APR52_25145 | P54175 | Positive | 5418570 - 5419259 | 24596.4 |
| slyx protein | APR52_25150 | Q46QJ0 | Negative | 5419275 - 5419499 | 8432.91 |
| oxidoreductase | APR52_25155 | Not Available | Negative | 5419574 - 5420470 | 31598.0 |
| 3-ketoacyl-acp reductase | APR52_25160 | Not Available | Negative | 5420499 - 5421242 | 25874.9 |
| transcriptional regulator | APR52_25165 | Not Available | Positive | 5421366 - 5422271 | 33244.0 |
| type vi secretion protein impa | APR52_25170 | Q9I3K1 | Positive | 5422427 - 5424889 | 89217.2 |
| hypothetical protein | APR52_25175 | Not Available | Positive | 5424886 - 5425905 | 36290.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
