Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | APR52_25080 | Q52814 | Positive | 5406563 - 5407297 | 26875.8 |
| amino acid abc transporter atp-binding protein | APR52_25085 | Not Available | Positive | 5407294 - 5408037 | 27528.5 |
| iron oxidase | APR52_25090 | Q54RA4 | Positive | 5408034 - 5409059 | 37277.5 |
| hypothetical protein | APR52_25095 | Not Available | Negative | 5409002 - 5409325 | 11891.9 |
| had family hydrolase | APR52_25100 | Q7ADF8 | Negative | 5409322 - 5410002 | 23989.9 |
| arabinose abc transporter permease | APR52_25105 | Not Available | Negative | 5410090 - 5411424 | 47345.6 |
| cytochrome o ubiquinol oxidase | APR52_25110 | Q9WWR1 | Positive | 5411612 - 5412646 | 38221.4 |
| cytochrome o ubiquinol oxidase subunit i | APR52_25115 | P0ABJ0 | Positive | 5412649 - 5414652 | 74692.8 |
| cytochrome o ubiquinol oxidase subunit iii | APR52_25120 | P0ABJ4 | Positive | 5414645 - 5415313 | 24292.8 |
| cytochrome c oxidase subunit iii | APR52_25125 | P0ABJ7 | Positive | 5415310 - 5415720 | 15023.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
