Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | APR52_25030 | Q12EY5 | Negative | 5396611 - 5397579 | 34939.0 |
| peptidylprolyl isomerase | APR52_25035 | P0AEM2 | Negative | 5397611 - 5398063 | 15931.7 |
| hypothetical protein | APR52_25040 | Not Available | Positive | 5398171 - 5398848 | 24626.1 |
| dna mismatch repair protein muts | APR52_25045 | A7FGK4 | Positive | 5398848 - 5399519 | 24487.5 |
| 2', 3'-cyclic nucleotide 2'-phosphodiesterase | APR52_25050 | P26265 | Negative | 5399555 - 5401672 | 74164.0 |
| ferredoxin reductase | APR52_25055 | P33009 | Negative | 5401782 - 5403005 | 42743.3 |
| globin | APR52_25060 | Not Available | Negative | 5403034 - 5403453 | 16192.2 |
| trans-2-enoyl-coa reductase | APR52_25065 | C5CWP4 | Negative | 5403457 - 5404659 | 42677.9 |
| amino acid abc transporter substrate-binding protein | APR52_25070 | P37902 | Positive | 5404861 - 5405688 | 29393.4 |
| abc transporter permease | APR52_25075 | Not Available | Positive | 5405848 - 5406543 | 25603.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
