Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | APR52_24980 | C5CXY9 | Negative | 5385786 - 5388572 | 104292.0 |
| hypothetical protein | APR52_24985 | Not Available | Positive | 5388794 - 5389102 | 11269.8 |
| ornithine cyclodeaminase | APR52_24990 | P58339 | Positive | 5389169 - 5390158 | 34739.6 |
| hypothetical protein | APR52_24995 | Not Available | Positive | 5390460 - 5390978 | 19467.3 |
| hypothetical protein | APR52_25000 | Not Available | Negative | 5391299 - 5391595 | 11190.3 |
| hypothetical protein | APR52_25005 | Not Available | Negative | 5391592 - 5392215 | 22962.5 |
| hypothetical protein | APR52_25010 | Not Available | Negative | 5392212 - 5393060 | 31941.4 |
| Trna-ser | Not Available | Not Available | Positive | 5394096 - 5394185 | Not Available |
| serine--trna ligase | APR52_25020 | C5CWN5 | Negative | 5394267 - 5395598 | 48440.9 |
| threonine dehydratase | APR52_25025 | Q10725 | Negative | 5395649 - 5396614 | 33368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
