Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | APR52_24930 | Q2SZG8 | Positive | 5374926 - 5375531 | 21593.1 |
| alginate o-acetyltransferase | APR52_24935 | O25526 | Positive | 5375606 - 5377096 | 55791.3 |
| hypothetical protein | APR52_24940 | Not Available | Positive | 5377098 - 5378111 | 37638.4 |
| cell division protein zapd | APR52_24945 | Q46X09 | Positive | 5378146 - 5378901 | 28684.4 |
| hypothetical protein | APR52_24950 | Q479P5 | Positive | 5378898 - 5379122 | 8264.6 |
| acyltransferase | APR52_24955 | Not Available | Negative | 5379151 - 5381118 | 71713.9 |
| acyltransferase | APR52_24960 | O05402 | Negative | 5381142 - 5383106 | 70867.5 |
| 7,8-dihydro-8-oxoguanine-triphosphatase | APR52_24965 | P44932 | Negative | 5383193 - 5383651 | 16793.1 |
| aaa family atpase | APR52_24970 | Not Available | Negative | 5383648 - 5384523 | 32562.5 |
| ornithine acetyltransferase | APR52_24975 | Q63QK7 | Negative | 5384531 - 5385760 | 42845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
