Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_24830 | Not Available | Negative | 5356783 - 5357061 | 9856.48 |
| glutamyl-trna reductase | APR52_24835 | A1TTC3 | Positive | 5357155 - 5358426 | 45620.9 |
| peptide chain release factor 1 | APR52_24840 | C5CXW3 | Positive | 5358523 - 5359611 | 40294.5 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | APR52_24845 | Q8PC99 | Positive | 5359608 - 5360459 | 29897.7 |
| glutaredoxin | APR52_24850 | P73056 | Positive | 5360489 - 5360815 | 11836.2 |
| mannose-6-phosphate isomerase | APR52_24855 | Not Available | Positive | 5360829 - 5361341 | 18452.5 |
| hypothetical protein | APR52_24860 | A0A0F6BAS6 | Positive | 5361421 - 5362704 | 47365.7 |
| lytic transglycosylase | APR52_24865 | Not Available | Negative | 5362720 - 5363403 | 25311.5 |
| proline--trna ligase | APR52_24870 | C5CXW9 | Negative | 5363400 - 5365145 | 63804.9 |
| rna pyrophosphohydrolase | APR52_24875 | C5CXX0 | Positive | 5365283 - 5365960 | 26444.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
