Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | APR52_24730 | Q9GZV3 | Negative | 5333363 - 5334811 | 51986.1 |
| ubiquinone biosynthesis protein ubib | APR52_24735 | C5CWY2 | Negative | 5334887 - 5336452 | 59986.6 |
| hypothetical protein | APR52_24740 | Not Available | Negative | 5336449 - 5337015 | 20528.6 |
| preprotein translocase subunit tim44 | APR52_24745 | Not Available | Negative | 5337067 - 5338083 | 34269.8 |
| ubiquinone biosynthesis methyltransferase ubie | APR52_24750 | Q475X0 | Negative | 5338115 - 5338846 | 26745.4 |
| hypothetical protein | APR52_24755 | Not Available | Negative | 5338994 - 5339407 | 14672.2 |
| hypothetical protein | APR52_24760 | Not Available | Negative | 5339418 - 5339867 | 16181.4 |
| fad-linked oxidase | APR52_24765 | O29853 | Negative | 5339864 - 5343742 | 142392.0 |
| d-3-phosphoglycerate dehydrogenase | APR52_24770 | P43885 | Negative | 5343872 - 5345104 | 43846.0 |
| glycerol-3-phosphate abc transporter substrate-binding protein | APR52_24775 | Q6CZ31 | Positive | 5345336 - 5346649 | 47706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
