Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein csbd | APR52_24680 | Not Available | Negative | 5325721 - 5325918 | 6829.1 |
| hypothetical protein | APR52_24685 | Not Available | Negative | 5326066 - 5326914 | 30544.8 |
| hypothetical protein | APR52_24690 | Not Available | Negative | 5326918 - 5327799 | 31503.4 |
| blue light sensor protein | APR52_24695 | Not Available | Negative | 5327874 - 5328296 | 15379.7 |
| gtp cyclohydrolase | APR52_24700 | B1MGU9 | Negative | 5328298 - 5329029 | 27614.6 |
| endonuclease | APR52_24705 | P0AAW3 | Negative | 5329103 - 5329858 | 28540.3 |
| dihydroneopterin triphosphate pyrophosphatase | APR52_24710 | P44635 | Negative | 5329855 - 5330319 | 17291.6 |
| aspartate--trna(asp/asn) ligase | APR52_24715 | C5CWX8 | Negative | 5330403 - 5332214 | 67536.4 |
| hypothetical protein | APR52_24720 | Not Available | Negative | 5332250 - 5332885 | 23049.4 |
| fmdb family transcriptional regulator | APR52_24725 | Not Available | Negative | 5332929 - 5333255 | 10576.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
