Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | APR52_24580 | Q89SC0 | Positive | 5309308 - 5309946 | 23007.4 |
| 6-pyruvoyl tetrahydrobiopterin synthase | APR52_24585 | Not Available | Positive | 5309975 - 5310337 | 13805.6 |
| quinolinate synthetase | APR52_24590 | A4G431 | Negative | 5310353 - 5311468 | 39701.5 |
| nicotinate-nucleotide pyrophosphorylase | APR52_24595 | P30819 | Negative | 5311482 - 5312357 | 31082.4 |
| glycerol-3-phosphate dehydrogenase | APR52_24600 | C5CWV5 | Negative | 5312383 - 5313411 | 34887.2 |
| protein-export protein secb | APR52_24605 | A1TTW2 | Negative | 5313441 - 5313905 | 16842.2 |
| glutaredoxin | APR52_24610 | Q9JVU9 | Negative | 5314035 - 5314301 | 9697.93 |
| sulfurtransferase | APR52_24615 | P54510 | Negative | 5314322 - 5314729 | 14299.5 |
| phosphoglyceromutase | APR52_24620 | C5CWV9 | Positive | 5314814 - 5315557 | 27684.8 |
| peptidase s41 | APR52_24625 | Q44879 | Positive | 5315667 - 5317109 | 52165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
