Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-5'-phosphate-dependent protein subunit beta | APR52_24525 | Q58860 | Positive | 5296458 - 5297600 | 40923.1 |
| alanine racemase | APR52_24530 | B2DFG5 | Negative | 5297636 - 5298769 | 39958.0 |
| hypothetical protein | APR52_24540 | Not Available | Negative | 5301450 - 5303279 | 67892.3 |
| hypothetical protein | APR52_24545 | P55184 | Negative | 5303279 - 5303992 | 25414.8 |
| hypothetical protein | APR52_24550 | Not Available | Negative | 5304074 - 5304550 | 17712.0 |
| acetyl-coa carboxyl transferase | APR52_24555 | Not Available | Positive | 5304622 - 5304828 | 8068.61 |
| segregation and condensation protein a | APR52_24560 | Q87BI4 | Positive | 5304904 - 5305746 | 32124.3 |
| l-aspartate oxidase | APR52_24565 | Q8XWM7 | Positive | 5305872 - 5307452 | 56402.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | APR52_24570 | A1VKS3 | Positive | 5307522 - 5308415 | 31049.6 |
| pantoate--beta-alanine ligase | APR52_24575 | C5CWV0 | Positive | 5308460 - 5309311 | 31269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
