Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydratase | APR52_24425 | Not Available | Negative | 5276788 - 5277585 | 28802.2 |
| hypothetical protein | APR52_24430 | Not Available | Positive | 5277710 - 5278231 | 18128.6 |
| urease accessory protein ureg | APR52_24435 | C5CY05 | Negative | 5278250 - 5278900 | 23571.6 |
| urease accessory protein uref | APR52_24440 | A1TSZ9 | Negative | 5278924 - 5279604 | 24530.9 |
| urease accessory protein uree | APR52_24445 | Q21SY8 | Negative | 5279937 - 5280539 | 21687.7 |
| urease subunit alpha | APR52_24450 | C5CY00 | Negative | 5280641 - 5282359 | 60704.7 |
| chemotaxis protein | APR52_24455 | O87005 | Negative | 5282347 - 5283030 | 23921.3 |
| urease subunit beta | APR52_24460 | C5CXZ9 | Negative | 5283043 - 5283348 | 11034.1 |
| urease accessory protein urej | APR52_24465 | Not Available | Negative | 5283365 - 5283970 | 20008.1 |
| urease subunit gamma | APR52_24470 | C5CXZ7 | Negative | 5284008 - 5284310 | 10891.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
