Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_24375 | Not Available | Positive | 5267230 - 5268060 | 30284.7 |
| abc transporter substrate-binding protein | APR52_24380 | Not Available | Positive | 5268146 - 5269174 | 37585.3 |
| asnc family transcriptional regulator | APR52_24385 | Not Available | Positive | 5269272 - 5270021 | 28663.7 |
| hypothetical protein | APR52_24390 | Not Available | Positive | 5270018 - 5270356 | 13131.8 |
| n,n-dimethylformamidase | APR52_24395 | Q9LCC0 | Positive | 5270379 - 5272628 | 81193.0 |
| shikimate dehydrogenase | APR52_24400 | Q74D29 | Positive | 5272646 - 5273449 | 27367.4 |
| tetr family transcriptional regulator | APR52_24405 | Not Available | Positive | 5273595 - 5274155 | 20125.9 |
| glucose 1-dehydrogenase | APR52_24410 | A0A2H3D8Y2 | Positive | 5274274 - 5275014 | 26705.8 |
| nitronate monooxygenase | APR52_24415 | Not Available | Positive | 5275061 - 5276041 | 34709.3 |
| alpha-ketoglutarate-dependent dioxygenase | APR52_24420 | P37462 | Positive | 5276125 - 5276778 | 23290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
