Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | APR52_24325 | P37740 | Negative | 5255990 - 5256604 | 22265.8 |
| histidine kinase | APR52_24330 | Not Available | Negative | 5256601 - 5258769 | 79475.5 |
| hypothetical protein | APR52_24335 | Not Available | Negative | 5258849 - 5259529 | 25368.4 |
| hypothetical protein | APR52_24340 | P38072 | Positive | 5259719 - 5260222 | 17743.4 |
| hypothetical protein | APR52_24345 | Not Available | Positive | 5260219 - 5261766 | 57886.3 |
| fuculose phosphate aldolase | APR52_24350 | Q2RXI1 | Negative | 5261768 - 5262421 | 23136.4 |
| serine kinase | APR52_24355 | Not Available | Negative | 5262504 - 5263784 | 45300.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR52_24360 | Not Available | Positive | 5263896 - 5265149 | 44690.0 |
| hypothetical protein | APR52_24365 | Not Available | Positive | 5265189 - 5266331 | 40374.1 |
| abc transporter permease | APR52_24370 | Not Available | Positive | 5266328 - 5267233 | 32500.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
