Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_24275 | P10183 | Positive | 5244932 - 5245879 | 35001.7 |
| carnitine dehydratase | APR52_24280 | P08157 | Positive | 5246012 - 5247490 | 53064.3 |
| fumarate reductase | APR52_24285 | Q9Z4P0 | Positive | 5247532 - 5249013 | 52067.0 |
| hypothetical protein | APR52_24290 | Not Available | Positive | 5249100 - 5250071 | 33963.1 |
| lysr family transcriptional regulator | APR52_24295 | Not Available | Positive | 5250132 - 5251064 | 34770.2 |
| dna-binding protein | APR52_24300 | P43722 | Negative | 5251143 - 5251568 | 14361.8 |
| hypothetical protein | APR52_24305 | A9MJ53 | Negative | 5251699 - 5252895 | 40340.5 |
| methyltransferase | APR52_24310 | Not Available | Negative | 5253029 - 5253694 | 23580.2 |
| tetr family transcriptional regulator | APR52_24315 | Not Available | Positive | 5253778 - 5254410 | 23111.6 |
| alpha-ketoglutarate permease | APR52_24320 | P0AEX3 | Negative | 5254483 - 5255820 | 47950.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
