Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 5232245 - 5232332 | Not Available |
| aldehyde oxidoreductase | APR52_24230 | Q8X6I9 | Positive | 5232751 - 5233395 | 22344.7 |
| molybdopterin dehydrogenase | APR52_24235 | P77324 | Positive | 5233392 - 5234342 | 33601.5 |
| xanthine dehydrogenase | APR52_24240 | P77489 | Positive | 5234348 - 5236558 | 77772.1 |
| agmatine deiminase | APR52_24245 | O86509 | Negative | 5236565 - 5237644 | 39038.2 |
| agmatine deiminase | APR52_24250 | Not Available | Negative | 5237685 - 5238842 | 40782.7 |
| lysr family transcriptional regulator | APR52_24255 | P55576 | Negative | 5238919 - 5239803 | 32365.9 |
| hypothetical protein | APR52_24260 | P77748 | Negative | 5239857 - 5242928 | 111642.0 |
| hypothetical protein | APR52_24265 | Not Available | Negative | 5242948 - 5243940 | 34134.1 |
| amidohydrolase | APR52_24270 | Q93PS7 | Negative | 5243963 - 5244676 | 25590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
