Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | APR52_24175 | Q9K0C5 | Positive | 5222687 - 5223262 | 20915.5 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | APR52_24180 | P0AG25 | Negative | 5223285 - 5225540 | 83053.6 |
| dna-directed rna polymerase subunit omega | APR52_24185 | C5CYY0 | Negative | 5225636 - 5225839 | 7431.29 |
| guanylate kinase | APR52_24190 | Q12DV7 | Negative | 5225870 - 5226490 | 22957.3 |
| hypothetical protein | APR52_24195 | P44726 | Negative | 5226511 - 5227434 | 33441.2 |
| serine/threonine protein kinase | APR52_24200 | A6QGC0 | Positive | 5227526 - 5228533 | 37664.6 |
| serine/threonine protein phosphatase | APR52_24205 | Not Available | Positive | 5228583 - 5229494 | 32779.1 |
| ribonuclease ph | APR52_24210 | Q2SY74 | Positive | 5229561 - 5230292 | 25615.8 |
| purine ntp phosphatase | APR52_24215 | A1TT41 | Positive | 5230345 - 5230944 | 21214.4 |
| coproporphyrinogen iii oxidase | APR52_24220 | P52062 | Positive | 5230935 - 5232209 | 46830.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
