Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | APR52_01740 | O05617 | Positive | 374620 - 375585 | 33663.3 |
| ribosomal subunit interface protein | APR52_01745 | P23099 | Positive | 375611 - 376915 | 48174.0 |
| aromatic-ring-hydroxylating dioxygenase | APR52_01750 | Not Available | Positive | 376912 - 377406 | 19237.9 |
| isochorismatase | APR52_01755 | Not Available | Positive | 377403 - 377990 | 20516.4 |
| short-chain dehydrogenase | APR52_01760 | Not Available | Positive | 378009 - 378800 | 26883.3 |
| diguanylate phosphodiesterase | APR52_01765 | Not Available | Negative | 378797 - 379495 | 25935.3 |
| hypothetical protein | APR52_01770 | Not Available | Negative | 379857 - 381089 | 45027.2 |
| hypothetical protein | APR52_01775 | Not Available | Negative | 381134 - 382336 | 41384.0 |
| flagellar biosynthesis protein flgk | APR52_01780 | P33235 | Negative | 382357 - 384240 | 64243.4 |
| glucosaminidase | APR52_01785 | Not Available | Negative | 384275 - 385129 | 30541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
