Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_24125 | Not Available | Negative | 5211778 - 5213676 | 68963.2 |
| formamidopyrimidine-dna glycosylase | APR52_24130 | C5CYZ1 | Positive | 5213748 - 5214557 | 29513.1 |
| dynamin family protein | APR52_24135 | Not Available | Positive | 5214668 - 5216635 | 73163.8 |
| a/g-specific adenine glycosylase | APR52_24140 | Q05869 | Positive | 5216709 - 5217749 | 38561.3 |
| nucleotide-binding protein | APR52_24145 | C5CYY8 | Negative | 5217775 - 5218650 | 32639.1 |
| dna repair protein recn | APR52_24150 | A5F379 | Negative | 5218682 - 5220367 | 59994.9 |
| nad kinase | APR52_24155 | C5CYY6 | Negative | 5220369 - 5221277 | 32533.1 |
| hrca family transcriptional regulator | APR52_24160 | C5CYY5 | Positive | 5221308 - 5222315 | 36784.3 |
| Trna-met | Not Available | Not Available | Positive | 5222355 - 5222431 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5222502 - 5222578 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
