Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR52_24070 | Not Available | Positive | 5204416 - 5205219 | 28273.2 |
| twin-arginine translocation pathway signal protein | APR52_24075 | Not Available | Positive | 5205253 - 5206242 | 34226.7 |
| ferredoxin | APR52_24085 | P00208 | Positive | 5206718 - 5207011 | 10589.7 |
| hypothetical protein | APR52_24090 | Not Available | Negative | 5206997 - 5207476 | 17176.0 |
| peptidyl-trna hydrolase | APR52_24095 | C5CYZ7 | Negative | 5207573 - 5208205 | 22941.7 |
| 50s ribosomal protein l25 | APR52_24100 | C5CYZ6 | Negative | 5208289 - 5208930 | 23281.2 |
| ribose-phosphate pyrophosphokinase | APR52_24105 | Q8Y2E1 | Negative | 5209066 - 5210040 | 35083.3 |
| Trna-gln | Not Available | Not Available | Positive | 5210215 - 5210291 | Not Available |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | APR52_24115 | C5CYZ4 | Negative | 5210364 - 5211254 | 32026.5 |
| hypothetical protein | APR52_24120 | Not Available | Negative | 5211251 - 5211775 | 18412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
