Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_23920 | Not Available | Negative | 5172101 - 5172589 | 18006.6 |
| abc transporter permease | APR52_23925 | P74369 | Negative | 5172728 - 5173519 | 27524.7 |
| hypothetical protein | APR52_23930 | Q8RCU0 | Negative | 5173516 - 5174172 | 23088.8 |
| nitric oxide synthase | APR52_23935 | Q0HYB4 | Negative | 5174252 - 5176849 | 93657.9 |
| hypothetical protein | APR52_23940 | Not Available | Negative | 5176856 - 5177575 | 25011.0 |
| tonb-dependent receptor | APR52_23945 | Q9HUX3 | Negative | 5177579 - 5180059 | 88949.5 |
| iron dicitrate transport regulator fecr | APR52_23950 | Not Available | Negative | 5180184 - 5181188 | 36217.1 |
| rna polymerase subunit sigma | APR52_23955 | Not Available | Negative | 5181185 - 5181691 | 18722.7 |
| hypothetical protein | APR52_23960 | Not Available | Negative | 5181823 - 5182569 | 27023.9 |
| hypothetical protein | APR52_23965 | Not Available | Negative | 5182629 - 5184995 | 85053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
