Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_23870 | Not Available | Positive | 5159106 - 5160116 | 35712.7 |
| hypothetical protein | APR52_23875 | Not Available | Positive | 5160252 - 5162693 | 87266.7 |
| hypothetical protein | APR52_23880 | Not Available | Positive | 5162693 - 5163442 | 26533.9 |
| rna polymerase subunit sigma | APR52_23885 | Not Available | Positive | 5163531 - 5164058 | 19773.0 |
| hypothetical protein | APR52_23890 | Not Available | Positive | 5164025 - 5165011 | 35391.2 |
| hypothetical protein | APR52_23895 | Q6U607 | Positive | 5165141 - 5167693 | 91998.3 |
| hypothetical protein | APR52_23900 | Not Available | Negative | 5167719 - 5168210 | 17714.3 |
| tonb-dependent receptor | APR52_23905 | Q1REC0 | Negative | 5168323 - 5170476 | 78530.0 |
| hypothetical protein | APR52_23910 | Not Available | Negative | 5170855 - 5171196 | 12761.6 |
| hypothetical protein | APR52_23915 | Not Available | Positive | 5171344 - 5172099 | 27315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
