Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | APR52_23770 | O06724 | Negative | 5141218 - 5142087 | 31293.5 |
| arac family transcriptional regulator | APR52_23775 | Not Available | Positive | 5142273 - 5143199 | 33335.5 |
| hypothetical protein | APR52_23780 | Not Available | Positive | 5143222 - 5143458 | 8369.2 |
| tetr family transcriptional regulator | APR52_23785 | Not Available | Negative | 5143491 - 5144126 | 23629.6 |
| hypothetical protein | APR52_23790 | Q8P8Y5 | Positive | 5144308 - 5145945 | 55098.5 |
| hypothetical protein | APR52_23795 | A8G8C4 | Positive | 5145985 - 5146812 | 29054.8 |
| alpha/beta hydrolase | APR52_23800 | Not Available | Positive | 5146809 - 5147489 | 24024.0 |
| aspartate aminotransferase | APR52_23805 | O86459 | Negative | 5147497 - 5148717 | 43470.0 |
| diguanylate cyclase | APR52_23810 | Q48806 | Negative | 5148714 - 5149379 | 23415.9 |
| dimethylmenaquinone methyltransferase | APR52_23815 | Q9KBI9 | Negative | 5149415 - 5150080 | 23766.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
