Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenazine biosynthesis protein phzf | APR52_23720 | Q8NIL3 | Positive | 5128658 - 5129539 | 31156.2 |
| glutathione s-transferase | APR52_23725 | Not Available | Negative | 5129551 - 5130243 | 25798.3 |
| short-chain dehydrogenase | APR52_23730 | Q6P5L8 | Positive | 5130429 - 5131250 | 29234.4 |
| amp-dependent synthetase | APR52_23735 | Not Available | Positive | 5131287 - 5132870 | 56469.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR52_23740 | Q0QLE4 | Negative | 5132905 - 5133765 | 30879.3 |
| twin-arginine translocation pathway signal | APR52_23745 | Not Available | Negative | 5133807 - 5134760 | 33069.9 |
| propionate catabolism operon regulatory protein prpr | APR52_23750 | Not Available | Positive | 5134969 - 5136936 | 70125.9 |
| hypothetical protein | APR52_23755 | Q9HUI3 | Negative | 5137072 - 5138841 | 65217.1 |
| cytosine deaminase | APR52_23760 | P40896 | Negative | 5139017 - 5140357 | 49118.1 |
| alpha/beta hydrolase | APR52_23765 | Not Available | Negative | 5140419 - 5141207 | 27715.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
