Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | APR52_23665 | O67694 | Positive | 5115499 - 5115882 | 13709.8 |
| hypothetical protein | APR52_23670 | Not Available | Positive | 5115879 - 5116580 | 25090.4 |
| aldehyde dehydrogenase | APR52_23675 | Not Available | Negative | 5116738 - 5118174 | 50194.0 |
| formate dehydrogenase | APR52_23685 | P33160 | Negative | 5118824 - 5120023 | 43865.4 |
| abc transporter | APR52_23690 | Q9C7F2 | Negative | 5120164 - 5123763 | 128484.0 |
| transcriptional regulator | APR52_23695 | Not Available | Positive | 5123887 - 5124810 | 33273.1 |
| antitoxin | APR52_23700 | Not Available | Positive | 5124927 - 5125166 | 8532.5 |
| twitching motility protein pilt | APR52_23705 | P65044 | Positive | 5125156 - 5125590 | 15576.8 |
| gntr family transcriptional regulator | APR52_23710 | P77730 | Negative | 5125772 - 5127244 | 53032.6 |
| aminotransferase | APR52_23715 | P61004 | Positive | 5127438 - 5128613 | 42271.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
