Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanyl-trna editing protein | APR52_23615 | Q97ZX2 | Positive | 5101545 - 5102270 | 26388.5 |
| hypothetical protein | APR52_23620 | Q9K4Z2 | Positive | 5102278 - 5103414 | 40159.1 |
| 3-methyladenine dna glycosylase | APR52_23625 | Not Available | Positive | 5103470 - 5104120 | 24082.7 |
| hypothetical protein | APR52_23630 | Not Available | Positive | 5104516 - 5106114 | 56977.1 |
| hypothetical protein | APR52_23635 | Not Available | Positive | 5106247 - 5107326 | 38714.6 |
| feruloyl esterase | APR52_23640 | Not Available | Negative | 5107393 - 5109013 | 56323.8 |
| hypothetical protein | APR52_23645 | P37734 | Negative | 5109114 - 5109965 | 29153.1 |
| hypothetical protein | APR52_23650 | Not Available | Positive | 5110292 - 5113261 | 97353.5 |
| hypothetical protein | APR52_23655 | Not Available | Positive | 5113332 - 5115056 | 61391.9 |
| energy transducer tonb | APR52_23660 | Q9ZJH1 | Positive | 5115078 - 5115518 | 15895.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
