Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_23560 | Q6GIH9 | Positive | 5089297 - 5090004 | 25450.8 |
| abc transporter permease | APR52_23565 | Not Available | Positive | 5090007 - 5091407 | 51384.3 |
| abc transporter permease | APR52_23570 | Not Available | Positive | 5091424 - 5092914 | 54188.4 |
| tonb-dependent receptor | APR52_23575 | P81549 | Positive | 5092959 - 5095160 | 79464.7 |
| hypothetical protein | APR52_23580 | Not Available | Negative | 5095157 - 5096017 | 31181.6 |
| hypothetical protein | APR52_23585 | Not Available | Negative | 5096014 - 5096724 | 25089.8 |
| hypothetical protein | APR52_23590 | Not Available | Negative | 5096888 - 5097562 | 24952.1 |
| hypothetical protein | APR52_23600 | Not Available | Negative | 5099246 - 5099608 | 12925.5 |
| arac family transcriptional regulator | APR52_23605 | Not Available | Positive | 5099695 - 5100534 | 31078.1 |
| hypothetical protein | APR52_23610 | Not Available | Positive | 5100624 - 5101520 | 31325.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
