Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR52_23510 | Not Available | Negative | 5078951 - 5079754 | 29795.9 |
| peptidase | APR52_23515 | Not Available | Negative | 5079760 - 5080599 | 31038.1 |
| dna mismatch repair protein muts | APR52_23520 | C5CTL8 | Negative | 5080628 - 5083225 | 93543.4 |
| magnesium transporter | APR52_23525 | Q9WZ31 | Positive | 5083767 - 5084744 | 36308.8 |
| hypothetical protein | APR52_23530 | Not Available | Positive | 5084796 - 5085272 | 17057.8 |
| disulfide bond formation protein dsba | APR52_23535 | P0AEJ1 | Positive | 5085269 - 5086798 | 54564.9 |
| fad-binding protein | APR52_23540 | Q46871 | Negative | 5086821 - 5087648 | 30355.1 |
| padr family transcriptional regulator | APR52_23545 | P64588 | Negative | 5087662 - 5088237 | 20760.7 |
| fur family transcriptional regulator | APR52_23550 | Not Available | Positive | 5088419 - 5088880 | 16546.4 |
| 50s ribosomal protein l36 | APR52_23555 | A9C021 | Positive | 5088980 - 5089129 | 5715.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
