Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_23460 | Not Available | Positive | 5069408 - 5070307 | 32609.4 |
| arylsulfatase | APR52_23465 | Not Available | Positive | 5070324 - 5070986 | 22940.6 |
| hypothetical protein | APR52_23470 | Not Available | Negative | 5070978 - 5071886 | 33193.2 |
| udp pyrophosphate phosphatase | APR52_23475 | C5CTM8 | Positive | 5072092 - 5072919 | 30025.5 |
| histidine kinase | APR52_23480 | O32198 | Negative | 5072937 - 5074754 | 66315.4 |
| luxr family transcriptional regulator | APR52_23485 | Not Available | Negative | 5074769 - 5075506 | 26036.7 |
| molybdenum cofactor biosysynthesis protein | APR52_23490 | Not Available | Positive | 5075606 - 5076121 | 18111.2 |
| twin-arginine translocation pathway signal | APR52_23495 | Not Available | Negative | 5076123 - 5077091 | 33576.8 |
| arac family transcriptional regulator | APR52_23500 | Not Available | Negative | 5077108 - 5077791 | 24210.2 |
| arac family transcriptional regulator | APR52_23505 | Not Available | Positive | 5077948 - 5078943 | 36033.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
