Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_23410 | Not Available | Negative | 5053866 - 5054159 | 10827.3 |
| fatty acid hydroxylase | APR52_23415 | P68434 | Negative | 5054156 - 5055103 | 36106.1 |
| hypothetical protein | APR52_23420 | Not Available | Negative | 5055149 - 5055670 | 18224.1 |
| secretion protein hlyd | APR52_23425 | A6TBH3 | Positive | 5055997 - 5057694 | 58175.8 |
| multidrug transporter | APR52_23430 | Q668C6 | Positive | 5057764 - 5060892 | 110577.0 |
| nodulation protein | APR52_23435 | A7ZNP9 | Positive | 5061578 - 5064892 | 117323.0 |
| rnd transporter | APR52_23440 | Not Available | Positive | 5064937 - 5066397 | 51011.9 |
| hypothetical protein | APR52_23445 | Not Available | Negative | 5066526 - 5066891 | 13014.1 |
| dna-binding protein | APR52_23450 | Not Available | Negative | 5066978 - 5067844 | 30929.1 |
| hypothetical protein | APR52_23455 | O94562 | Positive | 5068018 - 5069352 | 47258.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
