Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_23360 | Not Available | Negative | 5042985 - 5043326 | 12460.2 |
| hypothetical protein | APR52_23365 | Not Available | Positive | 5043484 - 5044626 | 42058.9 |
| succinylglutamate desuccinylase | APR52_23370 | Not Available | Positive | 5044702 - 5045637 | 34125.7 |
| restriction endonuclease | APR52_23375 | Not Available | Negative | 5045719 - 5046624 | 32737.3 |
| hypothetical protein | APR52_23380 | Not Available | Negative | 5046642 - 5048390 | 65734.3 |
| peptidase m23 | APR52_23385 | Not Available | Negative | 5048540 - 5049448 | 31950.6 |
| glutamine--trna ligase | APR52_23390 | Q7WGA6 | Negative | 5049542 - 5051356 | 67812.8 |
| hypothetical protein | APR52_23395 | Not Available | Positive | 5051494 - 5051820 | 11438.5 |
| lytr family transcriptional regulator | APR52_23400 | Q8D4U6 | Negative | 5051903 - 5052748 | 30580.9 |
| histidine kinase | APR52_23405 | Q8EQQ2 | Negative | 5052745 - 5053869 | 40487.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
