Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | APR52_23260 | A3N6H2 | Positive | 5023959 - 5024909 | 35850.8 |
| aromatic amino acid aminotransferase | APR52_23265 | P04693 | Positive | 5024943 - 5026106 | 41395.8 |
| monooxygenase | APR52_23270 | Q02N79 | Positive | 5026103 - 5027263 | 41645.3 |
| abc transporter substrate-binding protein | APR52_23275 | Not Available | Positive | 5027377 - 5028363 | 34381.5 |
| hypothetical protein | APR52_23280 | Not Available | Negative | 5028371 - 5028634 | 9431.75 |
| carboxylesterase | APR52_23285 | Q6CGL4 | Positive | 5028874 - 5029539 | 23576.4 |
| antibiotic biosynthesis monooxygenase | APR52_23290 | Not Available | Positive | 5029583 - 5029930 | 12370.9 |
| glutamate--cysteine ligase | APR52_23295 | Q0VSY7 | Positive | 5030072 - 5031631 | 57265.4 |
| hypothetical protein | APR52_23300 | Not Available | Positive | 5031834 - 5032220 | 14409.8 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_23305 | Q9NKW1 | Positive | 5032331 - 5033251 | 31469.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
