Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | APR52_01640 | Not Available | Positive | 353616 - 354506 | 33477.5 |
| hypothetical protein | APR52_01645 | Not Available | Positive | 354494 - 355840 | 46492.1 |
| hypothetical protein | APR52_01650 | Q7RTY0 | Positive | 355990 - 357219 | 42297.8 |
| hypothetical protein | APR52_01655 | Not Available | Positive | 357543 - 358070 | 18474.1 |
| hypothetical protein | APR52_01660 | Not Available | Positive | 358067 - 358636 | 19198.8 |
| hypothetical protein | APR52_01665 | Not Available | Positive | 358636 - 359415 | 26939.8 |
| hypothetical protein | APR52_01670 | Not Available | Positive | 359493 - 360029 | 18345.1 |
| pilus assembly protein pily | APR52_01675 | Q02GC2 | Positive | 360074 - 363361 | 114013.0 |
| hypothetical protein | APR52_01680 | Not Available | Positive | 363439 - 363846 | 14199.7 |
| hypothetical protein | APR52_01685 | Q923B0 | Negative | 363916 - 364350 | 15870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
