Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_23105 | Not Available | Negative | 4996334 - 4996792 | 16966.2 |
| hypothetical protein | APR52_23110 | P53933 | Negative | 4997009 - 4998112 | 41094.1 |
| dihydrofolate reductase | APR52_23115 | Q9JSQ9 | Negative | 4998109 - 4998618 | 18572.1 |
| thymidylate synthase | APR52_23120 | Q12CI6 | Negative | 4998689 - 4999558 | 33418.6 |
| rna polymerase subunit sigma | APR52_23125 | Not Available | Positive | 4999655 - 5000194 | 19637.8 |
| hypothetical protein | APR52_23130 | Not Available | Positive | 5000191 - 5001207 | 35829.7 |
| tonb-dependent receptor | APR52_23135 | Not Available | Positive | 5001322 - 5003751 | 86917.5 |
| nitrile hydratase subunit alpha | APR52_23140 | P97051 | Positive | 5003767 - 5004408 | 23516.8 |
| nitrile hydratase subunit beta | APR52_23145 | P29379 | Positive | 5004405 - 5005064 | 24030.4 |
| nitrile hydratase | APR52_23150 | Not Available | Positive | 5005061 - 5005432 | 13442.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
