Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclohexanecarboxylate-coa ligase | APR52_23005 | P38135 | Positive | 4975011 - 4976675 | 59837.4 |
| abc transporter substrate-binding protein | APR52_23010 | Not Available | Positive | 4976731 - 4977723 | 34562.9 |
| enoyl-coa hydratase | APR52_23015 | Q52995 | Positive | 4977740 - 4978519 | 27904.9 |
| acetyl-coa acetyltransferase | APR52_23020 | I6XHJ3 | Positive | 4978609 - 4979787 | 40971.6 |
| long-chain fatty acid--coa ligase | APR52_23025 | Not Available | Positive | 4980037 - 4981677 | 59907.2 |
| hypothetical protein | APR52_23030 | Q32Q92 | Negative | 4981872 - 4983140 | 45386.2 |
| aminoglycoside phosphotransferase | APR52_23035 | P00552 | Negative | 4983176 - 4983961 | 28994.4 |
| hypothetical protein | APR52_23040 | Not Available | Negative | 4984058 - 4984324 | 9421.01 |
| hypothetical protein | APR52_23045 | Not Available | Positive | 4984548 - 4984817 | 10288.1 |
| hypothetical protein | APR52_23050 | Not Available | Positive | 4984934 - 4985161 | 7927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
