Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine dehydratase | APR52_22955 | Not Available | Positive | 4963273 - 4964385 | 39254.1 |
| fatty-acid--coa ligase | APR52_22960 | Not Available | Positive | 4964436 - 4965995 | 56591.8 |
| acyl-coa dehydrogenase | APR52_22965 | Not Available | Positive | 4966044 - 4967192 | 41880.1 |
| hypothetical protein | APR52_22970 | Not Available | Positive | 4967262 - 4967888 | 23517.1 |
| luxr family transcriptional regulator | APR52_22975 | A8GKU0 | Negative | 4967904 - 4970624 | 98778.4 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | APR52_22980 | O18404 | Positive | 4970760 - 4971542 | 26909.4 |
| transcriptional regulator | APR52_22985 | O07458 | Negative | 4971555 - 4972070 | 19169.7 |
| 2-hydroxycyclohexanecarboxyl-coa dehydrogenase | APR52_22990 | A7IQH5 | Positive | 4972205 - 4972972 | 26484.8 |
| 2-ketocyclohexanecarboxyl-coa hydrolase | APR52_22995 | P23966 | Positive | 4973007 - 4973789 | 28534.1 |
| cyclohexanecarboxyl-coa dehydrogenase | APR52_23000 | Not Available | Positive | 4973812 - 4974963 | 41555.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
