Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase a8 | APR52_22805 | Q04729 | Positive | 4930995 - 4931816 | 29701.4 |
| fatty acid hydroxylase | APR52_22810 | Not Available | Positive | 4931827 - 4932801 | 36966.6 |
| hypothetical protein | APR52_22815 | Not Available | Positive | 4932924 - 4933805 | 31828.9 |
| damage-inducible protein | APR52_22820 | B9E6E0 | Positive | 4933802 - 4934602 | 29235.4 |
| glutamine synthetase | APR52_22825 | Q46ZL2 | Positive | 4934750 - 4936165 | 52482.2 |
| hypothetical protein | APR52_22830 | Not Available | Positive | 4936313 - 4936816 | 17922.1 |
| histidine kinase | APR52_22835 | P19906 | Positive | 4936857 - 4937936 | 39998.2 |
| nitrogen regulation protein nr(i) | APR52_22840 | P41789 | Positive | 4937961 - 4939499 | 55555.7 |
| hypothetical protein | APR52_22845 | Not Available | Negative | 4939550 - 4940074 | 18532.4 |
| exodeoxyribonuclease iii | APR52_22850 | P44318 | Negative | 4940091 - 4940876 | 29491.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
