Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_22755 | Not Available | Negative | 4919101 - 4919631 | 18894.7 |
| dna gyrase subunit a | APR52_22760 | P48372 | Negative | 4919682 - 4922327 | 97910.2 |
| hypothetical protein | APR52_22765 | Q05146 | Positive | 4922553 - 4923212 | 23083.5 |
| 3-demethylubiquinone-9 3-methyltransferase | APR52_22770 | Q21UL3 | Positive | 4923344 - 4924066 | 26335.8 |
| phosphoglycolate phosphatase | APR52_22775 | Q9HZ62 | Positive | 4924063 - 4924728 | 23619.2 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 4924742 - 4925126 | Not Available |
| methyltransferase type 12 | APR52_22785 | O05979 | Positive | 4925688 - 4927289 | 58514.4 |
| gamma-glutamyltranspeptidase | APR52_22790 | P36267 | Positive | 4927346 - 4929079 | 61236.3 |
| 16s rrna pseudouridine(516) synthase | APR52_22795 | P65841 | Positive | 4929170 - 4929901 | 26405.9 |
| hypothetical protein | APR52_22800 | Not Available | Positive | 4929992 - 4931011 | 36733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
