Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_01590 | P42620 | Negative | 344393 - 345322 | 34268.1 |
| hypothetical protein | APR52_01595 | B1ZJX9 | Negative | 345334 - 345936 | 20872.9 |
| hypothetical protein | APR52_01600 | Not Available | Negative | 346044 - 346940 | 32354.1 |
| hypothetical protein | APR52_01605 | Not Available | Positive | 347077 - 347559 | 16626.1 |
| hypothetical protein | APR52_01610 | Not Available | Negative | 347575 - 348501 | 33205.0 |
| abc transporter atp-binding protein | APR52_01615 | Not Available | Negative | 348618 - 349751 | 40849.9 |
| polyamine abc transporter permease | APR52_01620 | P45169 | Negative | 349748 - 350575 | 29649.7 |
| spermidine/putrescine abc transporter permease | APR52_01625 | P31135 | Negative | 350572 - 351387 | 29955.7 |
| abc transporter substrate-binding protein | APR52_01630 | Not Available | Negative | 351515 - 352630 | 41661.6 |
| aminomethyltransferase | APR52_01635 | Not Available | Positive | 352915 - 353619 | 25483.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
