Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| keto-deoxy-phosphogluconate aldolase | APR52_22595 | Q15X88 | Positive | 4885235 - 4885882 | 22237.0 |
| haloacid dehalogenase | APR52_22600 | Not Available | Positive | 4885890 - 4886621 | 26336.6 |
| hypothetical protein | APR52_22605 | Q60928 | Negative | 4886682 - 4888847 | 73682.8 |
| pyridoxamine 5-phosphate oxidase | APR52_22610 | Not Available | Negative | 4888987 - 4889514 | 19619.5 |
| hypothetical protein | APR52_22615 | Not Available | Positive | 4889817 - 4891043 | 46333.9 |
| conjugal transfer protein trbi | APR52_22620 | Not Available | Negative | 4891759 - 4893072 | 46033.5 |
| conjugal transfer protein trbg | APR52_22625 | Not Available | Negative | 4893081 - 4894094 | 36676.0 |
| conjugal transfer protein trbf | APR52_22630 | Not Available | Negative | 4894091 - 4894795 | 26050.8 |
| conjugal transfer protein trbl | APR52_22635 | Not Available | Negative | 4894808 - 4896175 | 45015.6 |
| conjugal transfer protein trbj | APR52_22640 | Not Available | Negative | 4896194 - 4896967 | 28180.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
