Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligand-gated channel protein | APR52_22545 | Q9JZN9 | Positive | 4875058 - 4877157 | 74999.7 |
| transporter | APR52_22550 | Not Available | Positive | 4877219 - 4878169 | 33669.7 |
| hypothetical protein | APR52_22555 | Not Available | Negative | 4878285 - 4878683 | 12531.8 |
| flagellar motor protein motb | APR52_22560 | Not Available | Positive | 4878702 - 4879916 | 43618.1 |
| pyridoxamine 5'-phosphate oxidase | APR52_22565 | A1TQY3 | Negative | 4879921 - 4880574 | 24721.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | APR52_22570 | Not Available | Positive | 4880607 - 4881191 | 19277.0 |
| superoxide dismutase | APR52_22575 | O66602 | Negative | 4881199 - 4881741 | 17912.1 |
| calcium transporter chac | APR52_22580 | B3STU3 | Negative | 4881738 - 4882472 | 26992.1 |
| hypothetical protein | APR52_22585 | Not Available | Positive | 4882578 - 4883183 | 20637.7 |
| phosphogluconate dehydratase | APR52_22590 | P31961 | Positive | 4883406 - 4885244 | 64437.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
