Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_22490 | Not Available | Negative | 4864487 - 4865419 | 32011.0 |
| cysteine methyltransferase | APR52_22495 | P52982 | Negative | 4865484 - 4865981 | 17668.9 |
| adenosine deaminase | APR52_22500 | P19219 | Negative | 4865988 - 4867595 | 57276.6 |
| phosphoglucomutase | APR52_22505 | P40390 | Positive | 4867707 - 4869089 | 48890.4 |
| channel protein tolc | APR52_22515 | Not Available | Negative | 4870534 - 4872072 | 53795.8 |
| sulfurtransferase | APR52_22520 | Q93WI0 | Negative | 4872097 - 4872435 | 12168.4 |
| protein-l-isoaspartate o-methyltransferase | APR52_22525 | A0LL58 | Negative | 4872450 - 4873127 | 24791.0 |
| tetr family transcriptional regulator | APR52_22530 | Not Available | Negative | 4873170 - 4873883 | 26620.0 |
| peptide methionine sulfoxide reductase | APR52_22535 | A4SWL6 | Positive | 4873983 - 4874534 | 20304.7 |
| hypothetical protein | APR52_22540 | Not Available | Positive | 4874637 - 4874978 | 11737.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
