Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tannase | APR52_22440 | Not Available | Positive | 4853305 - 4854927 | 56170.3 |
| lysr family transcriptional regulator | APR52_22445 | Not Available | Positive | 4855019 - 4855981 | 34054.1 |
| tetr family transcriptional regulator | APR52_22450 | Not Available | Negative | 4855983 - 4856666 | 25891.9 |
| oxidoreductase | APR52_22455 | P69166 | Positive | 4856880 - 4857683 | 26544.3 |
| saccharopine dehydrogenase | APR52_22460 | Q9GZE9 | Positive | 4857739 - 4858875 | 40686.7 |
| amp-dependent acyl-coa synthetase | APR52_22465 | O06417 | Positive | 4858881 - 4860434 | 55836.9 |
| hypothetical protein | APR52_22470 | Not Available | Negative | 4860480 - 4861310 | 28733.2 |
| alcohol dehydrogenase | APR52_22475 | P0A388 | Negative | 4861574 - 4862866 | 45898.4 |
| cytochrome c | APR52_22480 | D5WYQ6 | Negative | 4862877 - 4863626 | 26250.8 |
| hypothetical protein | APR52_22485 | Not Available | Positive | 4863817 - 4864479 | 24112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
