Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_22390 | Q9K0K9 | Negative | 4832814 - 4837097 | 145615.0 |
| hemolysin activation protein | APR52_22395 | P55125 | Negative | 4839653 - 4841119 | 53433.8 |
| peptidase c39 | APR52_22400 | P26760 | Negative | 4841116 - 4843335 | 80837.8 |
| cytochrome | APR52_22405 | Not Available | Negative | 4843557 - 4845914 | 87400.0 |
| abc transporter substrate-binding protein | APR52_22410 | Not Available | Negative | 4845941 - 4846918 | 33704.0 |
| iclr family transcriptional regulator | APR52_22415 | Not Available | Positive | 4847090 - 4847938 | 29777.2 |
| glutamate carboxypeptidase | APR52_22420 | P06621 | Positive | 4848099 - 4849295 | 41706.2 |
| luciferase | APR52_22425 | Not Available | Negative | 4849312 - 4850265 | 34625.7 |
| mfs transporter | APR52_22430 | Not Available | Positive | 4850463 - 4851779 | 47088.3 |
| 2-hydroxy-acid oxidase | APR52_22435 | Q7TNG8 | Positive | 4851854 - 4853269 | 49886.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
