Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n(5)-hydroxyornithine transformylase pvdf | APR52_22340 | Not Available | Negative | 4819493 - 4820332 | 31192.4 |
| iron reductase | APR52_22345 | Not Available | Negative | 4820433 - 4821287 | 31054.0 |
| cyclic peptide transporter | APR52_22350 | P33951 | Positive | 4821411 - 4823090 | 61028.8 |
| ornithine monooxygenase | APR52_22355 | Q51548 | Positive | 4823138 - 4824448 | 48791.1 |
| hemolysin secretion protein d | APR52_22360 | Not Available | Positive | 4824611 - 4825795 | 41458.5 |
| macrolide abc transporter atp-binding protein | APR52_22365 | Q88F88 | Positive | 4825792 - 4827747 | 69200.7 |
| transporter | APR52_22370 | P0C071 | Positive | 4827790 - 4829268 | 51448.1 |
| hypothetical protein | APR52_22375 | Not Available | Positive | 4829340 - 4829582 | 8645.19 |
| peptidase s45 | APR52_22380 | Q48KB0 | Positive | 4829770 - 4832166 | 85478.1 |
| hypothetical protein | APR52_22385 | Not Available | Negative | 4832177 - 4832770 | 22030.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
