Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4799681 - 4799756 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 4799820 - 4799893 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4799991 - 4800082 | Not Available |
| hypothetical protein | APR52_22300 | Not Available | Positive | 4800104 - 4800742 | 23400.3 |
| mfs transporter | APR52_22305 | Not Available | Positive | 4800784 - 4802103 | 46054.6 |
| hypothetical protein | APR52_22310 | Not Available | Negative | 4802107 - 4804302 | 74590.2 |
| hypothetical protein | APR52_22315 | Not Available | Negative | 4804399 - 4805178 | 28775.4 |
| glutamate racemase | APR52_22320 | Q1IEW8 | Negative | 4805195 - 4806058 | 30267.3 |
| non-ribosomal peptide synthetase | APR52_22325 | P0DUV4 | Positive | 4806196 - 4812903 | 241701.0 |
| ligand-gated channel protein | APR52_22335 | Not Available | Negative | 4817134 - 4819359 | 81677.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
