Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_22185 | Not Available | Positive | 4777472 - 4777978 | 18347.0 |
| thioredoxin | APR52_22190 | P59960 | Positive | 4778192 - 4778695 | 19040.7 |
| hypothetical protein | APR52_22195 | Not Available | Negative | 4778706 - 4779818 | 41522.2 |
| methyltransferase type 12 | APR52_22200 | Not Available | Negative | 4779815 - 4780663 | 31183.6 |
| ferrochelatase | APR52_22205 | A2SIR1 | Negative | 4780660 - 4781682 | 37735.0 |
| had family hydrolase | APR52_22210 | P0ADP0 | Positive | 4781698 - 4782429 | 26462.7 |
| nipsnap family containing protein | APR52_22215 | Not Available | Negative | 4782433 - 4782738 | 11849.0 |
| lysine transporter lyse | APR52_22220 | Not Available | Positive | 4782864 - 4783508 | 22704.2 |
| hypothetical protein | APR52_22225 | Not Available | Negative | 4783505 - 4783810 | 11213.7 |
| desaturase | APR52_22230 | Not Available | Negative | 4783807 - 4785060 | 43692.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
