Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_22135 | Not Available | Positive | 4768019 - 4769128 | 40837.0 |
| hypothetical protein | APR52_22140 | Not Available | Positive | 4769178 - 4769510 | 12090.8 |
| hypothetical protein | APR52_22145 | Not Available | Positive | 4769507 - 4769782 | 10534.5 |
| abc transporter permease | APR52_22150 | Not Available | Positive | 4769927 - 4771114 | 42513.4 |
| hypothetical protein | APR52_22155 | P12625 | Positive | 4771304 - 4772752 | 49079.2 |
| abc transporter atp-binding protein | APR52_22160 | Not Available | Positive | 4772798 - 4773565 | 27226.0 |
| abc transporter atp-binding protein | APR52_22165 | Not Available | Positive | 4773562 - 4774287 | 26158.0 |
| abc transporter permease | APR52_22170 | Not Available | Positive | 4774284 - 4775264 | 34645.2 |
| abc transporter permease | APR52_22175 | Q58666 | Positive | 4775422 - 4776492 | 38214.8 |
| hydrolase | APR52_22180 | Not Available | Positive | 4776514 - 4777404 | 32784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
