Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | APR52_22080 | Not Available | Positive | 4752039 - 4752998 | 32935.8 |
| tripartite tricarboxylate transporter tctb | APR52_22085 | Not Available | Positive | 4753093 - 4753644 | 18907.1 |
| tripartite tricarboxylate transporter tcta | APR52_22090 | Not Available | Positive | 4753734 - 4755254 | 52829.1 |
| rna polymerase subunit sigma | APR52_22095 | Not Available | Positive | 4755425 - 4755937 | 19346.4 |
| iron dicitrate transport regulator fecr | APR52_22100 | Not Available | Positive | 4755934 - 4756905 | 35259.2 |
| tonb-dependent receptor | APR52_22105 | Not Available | Positive | 4757032 - 4759461 | 86283.0 |
| rnd transporter | APR52_22110 | P25197 | Negative | 4759458 - 4762562 | 111519.0 |
| rnd transporter | APR52_22115 | Not Available | Negative | 4762584 - 4763792 | 41186.0 |
| tetr family transcriptional regulator | APR52_22125 | Not Available | Negative | 4765384 - 4766148 | 27982.8 |
| fis family transcriptional regulator | APR52_22130 | Q9APD9 | Positive | 4766452 - 4767978 | 55369.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
