Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_22030 | Not Available | Negative | 4742707 - 4743270 | 20823.9 |
| oxidoreductase | APR52_22035 | Not Available | Negative | 4743296 - 4744147 | 29320.3 |
| hypothetical protein | APR52_22040 | P37947 | Negative | 4744294 - 4745352 | 38301.7 |
| multidrug abc transporter atp-binding protein | APR52_22045 | O06967 | Negative | 4745401 - 4747215 | 64870.3 |
| hypothetical protein | APR52_22050 | Not Available | Positive | 4747363 - 4748031 | 23978.6 |
| hypothetical protein | APR52_22055 | Not Available | Negative | 4748095 - 4748304 | 7775.52 |
| polyphosphate kinase | APR52_22060 | M9XB82 | Negative | 4748441 - 4749247 | 30733.9 |
| rna-binding protein | APR52_22065 | Q44264 | Negative | 4749310 - 4749738 | 15981.0 |
| histidine kinase | APR52_22070 | Not Available | Negative | 4749742 - 4751163 | 51990.0 |
| two-component system response regulator | APR52_22075 | Not Available | Negative | 4751160 - 4751840 | 24947.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
