Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/oligopeptide/nickel abc transporter atp-binding protein | APR52_21980 | P26905 | Negative | 4730820 - 4731809 | 35945.9 |
| abc transporter permease | APR52_21985 | Not Available | Negative | 4731806 - 4732696 | 30631.4 |
| peptide abc transporter | APR52_21990 | Not Available | Negative | 4732686 - 4733606 | 32820.1 |
| long-chain fatty acid--coa ligase | APR52_21995 | Not Available | Positive | 4733989 - 4735671 | 61033.4 |
| aminoglycoside phosphotransferase | APR52_22000 | Not Available | Negative | 4735697 - 4736773 | 39641.3 |
| acyl-coa dehydrogenase | APR52_22005 | Not Available | Negative | 4736788 - 4737915 | 39139.9 |
| acyl-coa dehydrogenase | APR52_22010 | Not Available | Negative | 4737956 - 4739158 | 44369.7 |
| short-chain dehydrogenase | APR52_22015 | Q5RCF8 | Negative | 4739170 - 4739934 | 27148.6 |
| acyl-coa dehydrogenase | APR52_22020 | Not Available | Negative | 4739958 - 4741190 | 45740.2 |
| tetr family transcriptional regulator | APR52_22025 | Not Available | Positive | 4741447 - 4742700 | 45177.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
